Pseudomonas chlororaphis

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis is a Gram-negative, rod-shaped bacterium commonly found in specific ecological niches, including the nodules of Chamaecytisus albus and the rhizosphere. This microbe is known for its beneficial interactions with plant roots, where it contributes to nutrient cycling and may enhance plant growth through various mechanisms. The habitat of Pseudomonas chlororaphis in the root nodules of legumes like Chamaecytisus albus suggests a role in symbiotic relationships, potentially aiding in nitrogen fixation processes. In addition to its presence in root nodules, its location in the rhizosphere indicates that it may engage in interactions with other soil microorganisms, thereby influencing the microbial community structure and function in this environment. Pseudomonas species, including Pseudomonas chlororaphis, are often recognized for their metabolic versatility and capability to produce various secondary metabolites. Such traits can have implications for plant health and soil dynamics, although specific metabolic pathways and interactions remain to be fully elucidated in this species. The unique ecological niche that Pseudomonas chlororaphis occupies highlights its potential role in sustainable agricultural practices, particularly in promoting plant health and enhancing soil fertility through its interactions with host plants and other microbial populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain TAMOak81 chromosome, complete

Gene Summary

Adenine Count

1243657 bp

Thymine Count

1239818 bp

Guanine Count

2108619 bp

Cytosine Count

2119266 bp

Genome Length

6711360 bp

Protein-coding Genes

5923 genes

Non-Coding Genes

196 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis proteinC4K26_RS21425Not AvailableNegative4782457 - 478445173840.4
mray family glycosyltransferaseC4K26_RS21430Not AvailableNegative4784548 - 478555836795.2
nad-dependent epimerase/dehydratase family proteinC4K26_RS21435Not AvailableNegative4785569 - 478654335357.8
hypothetical proteinC4K26_RS21440Not AvailableNegative4786540 - 478753839314.6
serine o-acetyltransferaseC4K26_RS21445Not AvailableNegative4787535 - 478810120187.9
nad-dependent epimerase/dehydratase family proteinC4K26_RS21450Not AvailableNegative4788113 - 478924641629.0
o-antigen polymeraseC4K26_RS21455Not AvailableNegative4789313 - 479048544255.7
glycosyltransferase family 2 proteinC4K26_RS21460Not AvailableNegative4790489 - 479145735805.4
o-antigen translocaseC4K26_RS21465Not AvailableNegative4791501 - 479277247036.0
degt/dnrj/eryc1/strs family aminotransferaseC4K26_RS21470Not AvailableNegative4792779 - 479390040683.9

Displaying genes 4281 – 4290 of 12586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.