Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ED1a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1284417 bp
Thymine Count
1282079 bp
Guanine Count
1314936 bp
Cytosine Count
1328016 bp
Genome Length
5209548 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
685 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | ECED1_RS01200 | Not Available | Negative | 257714 - 258763 | 39072.9 |
| type vi secretion system baseplate subunit tssf | ECED1_RS01205 | Not Available | Negative | 258727 - 260568 | 70853.9 |
| type vi secretion system baseplate subunit tsse | ECED1_RS01210 | Not Available | Negative | 260574 - 260999 | 15986.8 |
| type vi secretion system contractile sheath large subunit | ECED1_RS01215 | Not Available | Negative | 261004 - 262488 | 55673.9 |
| type vi secretion system contractile sheath small subunit | ECED1_RS01220 | Not Available | Negative | 262511 - 263014 | 18438.2 |
| hcp family type vi secretion system effector | ECED1_RS01225 | Not Available | Positive | 263724 - 264242 | 19251.8 |
| type vi secretion system tip protein tssi/vgrg | ECED1_RS01235 | Not Available | Positive | 264463 - 266694 | 82938.2 |
| duf4123 domain-containing protein | ECED1_RS01240 | Not Available | Positive | 266707 - 267483 | 29517.2 |
| duf262 domain-containing protein | ECED1_RS29420 | Not Available | Positive | 268046 - 268464 | 14981.3 |
| duf3304 domain-containing protein | ECED1_RS01250 | Not Available | Positive | 268449 - 269003 | 20538.8 |
Pathways
13002 pathways
Health Effects
No health effects information available for this bacterium.




