Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial adhesin ecpd | ECS88_RS02320 | D5CVJ7 | Negative | 305135 - 306778 | 59964.1 |
| fimbrial usher ecpc | ECS88_RS02325 | D5CVJ8 | Negative | 306768 - 309293 | 91327.7 |
| fimbrial chaperone ecpb | ECS88_RS02330 | B7UJE0 | Negative | 309319 - 309987 | 24502.3 |
| common pilus major fimbrillin subunit ecpa | ECS88_RS02335 | B7UJE1 | Negative | 310044 - 310631 | 20096.5 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | ECS88_RS02340 | B7UJE2 | Negative | 310705 - 311247 | 21231.8 |
| tail fiber assembly protein | ECS88_RS02355 | Not Available | Positive | 312071 - 312296 | 8417.14 |
| type b 50s ribosomal protein l36 | ECS88_RS02360 | A7ZI30 | Negative | 312331 - 312471 | 5466.94 |
| type b 50s ribosomal protein l31 | ECS88_RS02365 | P0A7N3 | Negative | 312471 - 312734 | 9920.71 |
| small membrane protein ykgr | ECS88_RS28295 | C1P5Z8 | Negative | 313099 - 313200 | 3998.07 |
| nadh-dependent flavin oxidoreductase | ECS88_RS02380 | P54524 | Negative | 313674 - 314816 | 41854.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





