Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | ECS88_RS02175 | Q47151 | Positive | 278614 - 279363 | 28956.7 |
| rep-associated tyrosine transposase rayt | ECS88_RS02180 | Q47152 | Positive | 279539 - 280036 | 19998.8 |
| hypothetical protein | ECS88_RS27160 | Not Available | Negative | 280119 - 280277 | 5753.2 |
| tail fiber assembly protein | ECS88_RS02185 | D3GS80 | Negative | 280356 - 282068 | 62438.3 |
| putative lateral flagellar export/assembly protein lafu | ECS88_RS02190 | D3GSC3 | Positive | 282040 - 282825 | 28891.0 |
| dna polymerase iv | ECS88_RS02195 | A1A7U2 | Positive | 282896 - 283951 | 39504.1 |
| type i toxin-antitoxin system antitoxin yafn | ECS88_RS02200 | Q47156 | Positive | 284003 - 284296 | 11234.4 |
| type ii toxin-antitoxin system mrna interferase toxin yafo | ECS88_RS02205 | Q47157 | Positive | 284299 - 284697 | 15414.7 |
| gnat family n-acetyltransferase | ECS88_RS02210 | Q47158 | Positive | 284707 - 285159 | 17429.0 |
| rna ligase rtcb family protein | ECS88_RS02215 | P75675 | Positive | 285349 - 286488 | 41466.6 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





