Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | ECS88_RS02125 | P28912 | Positive | 269568 - 270332 | 29863.4 |
| hypothetical protein | ECS88_RS02130 | Not Available | Positive | 270561 - 271064 | 18897.4 |
| integrating conjugative element protein | ECS88_RS02135 | Not Available | Positive | 271158 - 271646 | 18004.2 |
| tail fiber assembly protein | ECS88_RS02140 | P28917 | Positive | 271672 - 271866 | 7519.94 |
| 2-oxoglutaramate amidase | ECS88_RS02145 | Q47679 | Negative | 271917 - 272687 | 29014.6 |
| ivy family c-type lysozyme inhibitor | ECS88_RS02150 | P0AD60 | Positive | 272868 - 273314 | 15996.1 |
| acyl-coa dehydrogenase fade | ECS88_RS02155 | Q47146 | Negative | 273357 - 275801 | 89274.8 |
| d-sedoheptulose 7-phosphate isomerase | ECS88_RS02160 | A7ZHY1 | Positive | 276041 - 276619 | 20816.0 |
| class ii glutamine amidotransferase | ECS88_RS02165 | Q47147 | Positive | 276824 - 277591 | 28598.1 |
| peptidoglycan meso-diaminopimelic acid protein amidase | ECS88_RS02170 | P0AAA0 | Negative | 277562 - 278302 | 28022.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





