Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | ECS88_RS02075 | Not Available | Negative | 257733 - 258782 | 39103.0 |
| type vi secretion system baseplate subunit tssf | ECS88_RS02080 | Not Available | Negative | 258746 - 260587 | 70805.8 |
| type vi secretion system baseplate subunit tsse | ECS88_RS02085 | Not Available | Negative | 260593 - 261018 | 16020.9 |
| type vi secretion system contractile sheath large subunit | ECS88_RS02090 | Q9I748 | Negative | 261023 - 262507 | 55658.9 |
| type vi secretion system contractile sheath small subunit | ECS88_RS02095 | Not Available | Negative | 262530 - 263033 | 18438.2 |
| hcp family type vi secretion system effector | ECS88_RS02100 | Q9HI36 | Positive | 263739 - 264257 | 19191.7 |
| type vi secretion system vgr family protein | ECS88_RS02105 | E0SIS4 | Positive | 264478 - 266460 | 74068.0 |
| duf2169 domain-containing protein | ECS88_RS02110 | Not Available | Positive | 266567 - 267613 | 40040.8 |
| paar-like domain-containing protein | ECS88_RS02115 | Not Available | Positive | 267606 - 269045 | 52188.8 |
| hypothetical protein | ECS88_RS02120 | Not Available | Positive | 269020 - 269310 | 10773.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





