Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | ECS88_RS02025 | Not Available | Negative | 243428 - 243907 | 17511.6 |
| vasl domain-containing protein | ECS88_RS02030 | Not Available | Negative | 243925 - 245283 | 51656.4 |
| type vi secretion system membrane subunit tssm | ECS88_RS02035 | Q9I755 | Negative | 245294 - 248761 | 132268.0 |
| type vi secretion system protein tssa | ECS88_RS02040 | Not Available | Negative | 248841 - 250283 | 53876.1 |
| type vi secretion system-associated protein vasi | ECS88_RS02045 | Not Available | Negative | 250288 - 251031 | 26508.7 |
| type vi secretion system atpase tssh | ECS88_RS02050 | Not Available | Negative | 251028 - 253787 | 100217.0 |
| type ivb secretion system protein icmh/dotu | ECS88_RS02055 | Not Available | Negative | 253797 - 254561 | 29417.9 |
| type vi secretion system baseplate subunit tssk | ECS88_RS02060 | Q9I753 | Negative | 254566 - 255912 | 49894.3 |
| type vi secretion system lipoprotein tssj | ECS88_RS02065 | Not Available | Negative | 255915 - 256439 | 19252.9 |
| type vi secretion system-associated fha domain protein tagh | ECS88_RS02070 | Not Available | Negative | 256436 - 257716 | 47192.9 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





