Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rho-binding antiterminator | ECS88_RS01875 | P0AFW8 | Negative | 218476 - 218736 | 9622.37 |
| yaep family protein | ECS88_RS01880 | B7MBH1 | Negative | 218723 - 218923 | 7213.65 |
| yaeq family protein | ECS88_RS01885 | P0AA97 | Positive | 219089 - 219634 | 20847.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | ECS88_RS01890 | P40711 | Positive | 219631 - 220053 | 15638.9 |
| envelope stress response activation lipoprotein nlpe | ECS88_RS01895 | P40710 | Positive | 220067 - 220777 | 25817.7 |
| yaef family permuted papain-like enzyme | ECS88_RS01900 | P37056 | Negative | 220933 - 221757 | 29942.9 |
| proline--trna ligase | ECS88_RS01905 | B7UJ96 | Negative | 221810 - 223528 | 63606.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | ECS88_RS01910 | P28634 | Negative | 223639 - 224346 | 26379.8 |
| rcs stress response system protein rcsf | ECS88_RS01915 | P69412 | Negative | 224343 - 224747 | 14164.3 |
| methionine abc transporter substrate-binding lipoprotein metq | ECS88_RS01920 | P28635 | Negative | 224865 - 225680 | 29433.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





