Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tric cation channel family protein | ECS88_RS01715 | P0AFP1 | Negative | 182821 - 183444 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | ECS88_RS01720 | P37028 | Negative | 183482 - 184282 | 29296.3 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | ECS88_RS01725 | A7ZHQ1 | Negative | 184275 - 184973 | 24355.4 |
| dgtpase | ECS88_RS01730 | B7MBE3 | Positive | 185057 - 186574 | 59377.2 |
| serine endoprotease degp | ECS88_RS01740 | P0C0V1 | Positive | 186704 - 188128 | 49342.3 |
| tail fiber assembly protein | ECS88_RS01745 | P37047 | Positive | 188285 - 189436 | 43457.8 |
| duf3461 family protein | ECS88_RS01750 | A7ZHQ5 | Negative | 189490 - 189876 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ECS88_RS01755 | B7UIL1 | Negative | 190188 - 191012 | 29892.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | ECS88_RS01760 | B7MBE8 | Negative | 191043 - 193715 | 102364.0 |
| type i methionyl aminopeptidase | ECS88_RS01765 | P0AE20 | Negative | 193777 - 194571 | 29332.5 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





