Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp reductase | ECS88_RS01400 | B7UIF3 | Positive | 115767 - 116810 | 37385.8 |
| protein transport protein hofc | ECS88_RS01405 | P36646 | Negative | 116845 - 118047 | 44288.0 |
| type ii secretion system protein gspe | ECS88_RS01410 | P36645 | Negative | 118037 - 119422 | 50635.4 |
| prepilin peptidase-dependent pilin | ECS88_RS01415 | P36647 | Negative | 119432 - 119872 | 15621.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | ECS88_RS01425 | P30011 | Negative | 120076 - 120969 | 32774.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | ECS88_RS01430 | P13016 | Positive | 121057 - 121608 | 20520.1 |
| beta-lactamase regulator ampe | ECS88_RS01435 | P0AE14 | Positive | 121605 - 122459 | 32170.0 |
| aromatic amino acid transporter arop | ECS88_RS01440 | Q8FL49 | Negative | 122502 - 123872 | 49561.9 |
| type vi secretion system tube protein tssd | ECS88_RS01445 | Not Available | Positive | 124400 - 126181 | 65777.7 |
| bacteriocin immunity protein | ECS88_RS01450 | Q03708 | Positive | 126184 - 126468 | 11030.1 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





