Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 3 dihydrofolate reductase | ECS88_RS01105 | P0ABQ5 | Positive | 52458 - 52937 | 18000.3 |
| type ii toxin-antitoxin system ccda family antitoxin | ECS88_RS01110 | Not Available | Positive | 53023 - 53256 | 8530.97 |
| tail fiber assembly protein | ECS88_RS27930 | Not Available | Positive | 53259 - 53574 | 11382.7 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | ECS88_RS01120 | B7MAH4 | Negative | 53571 - 54419 | 31568.7 |
| co2+/mg2+ efflux protein apag | ECS88_RS01125 | A7ZHE3 | Negative | 54426 - 54803 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ECS88_RS01130 | B7UI99 | Negative | 54806 - 55627 | 30363.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ECS88_RS01135 | Q8FL95 | Negative | 55624 - 56613 | 35265.1 |
| peptidylprolyl isomerase sura | ECS88_RS01140 | P0ABZ8 | Negative | 56613 - 57899 | 47286.5 |
| lps assembly protein lptd | ECS88_RS01145 | A1A7A3 | Negative | 57952 - 60306 | 89629.9 |
| co-chaperone djla | ECS88_RS01150 | Q8FL94 | Positive | 60561 - 61376 | 30567.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





