Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside hydrolase rihc | ECS88_RS00980 | B7MAF0 | Positive | 28803 - 29717 | 32601.7 |
| duf805 domain-containing protein | ECS88_RS00985 | Not Available | Positive | 29740 - 30105 | 13660.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ECS88_RS00990 | B7MAF2 | Positive | 30266 - 31087 | 28772.4 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | ECS88_RS01000 | Q8FLB1 | Positive | 31542 - 32690 | 41417.4 |
| carbamoyl-phosphate synthase large subunit | ECS88_RS01005 | Q8FLB0 | Positive | 32708 - 35929 | 117930.0 |
| is200/is605-like element is200c family transposase | ECS88_RS01020 | P59697 | Positive | 36153 - 36611 | 18028.0 |
| carnitine metabolism transcriptional regulator caif | ECS88_RS01035 | P0AE58 | Positive | 36901 - 37296 | 15363.0 |
| carnitine operon protein caie | ECS88_RS01040 | B7MAF8 | Negative | 37415 - 38005 | 21160.6 |
| crotonobetainyl-coa hydratase | ECS88_RS01045 | Q0TLV3 | Negative | 38011 - 38796 | 28177.8 |
| crotonobetaine/carnitine-coa ligase | ECS88_RS01050 | B7MAG0 | Negative | 38905 - 40458 | 58525.4 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





