Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | ECS88_RS27895 | Not Available | Positive | 46114 - 46227 | 4308.18 |
| hok/gef family protein | ECS88_RS00310 | P62671 | Positive | 46172 - 46294 | 4554.64 |
| integrase core domain-containing protein | ECS88_RS27710 | Not Available | Negative | 46595 - 46892 | 10784.8 |
| hypothetical protein | ECS88_RS00325 | Q02885 | Positive | 47193 - 47480 | 11099.4 |
| duf932 domain-containing protein | ECS88_RS00330 | P18005 | Positive | 47599 - 48420 | 31638.8 |
| transglycosylase slt domain-containing protein | ECS88_RS00335 | P47737 | Negative | 48716 - 49225 | 19317.3 |
| conjugal transfer relaxosome dna-binding protein tram | ECS88_RS00340 | P10026 | Positive | 49640 - 50023 | 14518.3 |
| conjugal transfer transcriptional regulator traj | ECS88_RS00345 | P06626 | Positive | 50210 - 50899 | 27063.2 |
| conjugal transfer relaxosome dna-bindin protein tray | ECS88_RS00350 | P06627 | Positive | 50998 - 51393 | 15184.2 |
| type iv conjugative transfer system pilin traa | ECS88_RS00355 | P04737 | Positive | 51426 - 51791 | 12769.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





