Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial usher fimd | ECS88_RS26340 | P30130 | Positive | 4887919 - 4890555 | 96531.8 |
| type 1 fimbria minor subunit fimf | ECS88_RS26345 | P08189 | Positive | 4890565 - 4891095 | 18700.3 |
| fimbrial protein | ECS88_RS26350 | P08190 | Positive | 4891168 - 4891611 | 15173.5 |
| type 1 fimbria d-mannose specific adhesin fimh | ECS88_RS26355 | P08191 | Positive | 4891631 - 4892533 | 31502.2 |
| gluconate permease gntp | ECS88_RS26360 | P0AC95 | Negative | 4892706 - 4894049 | 47141.0 |
| mannonate dehydratase | ECS88_RS26370 | A7ZVL9 | Positive | 4894389 - 4895573 | 44826.5 |
| fructuronate reductase | ECS88_RS26375 | P39160 | Positive | 4895654 - 4897114 | 53587.2 |
| uxu operon transcriptional regulator | ECS88_RS26385 | P39161 | Positive | 4897329 - 4898102 | 29281.8 |
| duf2686 family protein | ECS88_RS26390 | P39374 | Negative | 4898243 - 4899073 | 30754.7 |
| protein ytid | ECS88_RS28280 | P0DPC5 | Positive | 4899406 - 4899549 | 5485.36 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





