Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | ECS88_RS25615 | P0A9L3 | Positive | 4760093 - 4760713 | 22216.5 |
| d-serine/d-alanine/glycine transporter | ECS88_RS25620 | P0AAE1 | Positive | 4761022 - 4762434 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | ECS88_RS25625 | A7ZV87 | Negative | 4762479 - 4763141 | 24884.1 |
| dmt family transporter | ECS88_RS25630 | P39314 | Negative | 4763249 - 4764214 | 35251.6 |
| nad(p)h:quinone oxidoreductase | ECS88_RS25635 | P39315 | Negative | 4764323 - 4765183 | 29898.5 |
| helix-turn-helix domain-containing protein | ECS88_RS25640 | P0ACN2 | Positive | 4765272 - 4765652 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | ECS88_RS25645 | P08331 | Negative | 4765775 - 4767718 | 70787.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | ECS88_RS25650 | Q8FAG5 | Positive | 4767908 - 4768648 | 27205.4 |
| ytfj family protein | ECS88_RS25655 | P39187 | Negative | 4768638 - 4769195 | 20618.9 |
| duf1107 domain-containing protein | ECS88_RS25660 | P0ADE3 | Positive | 4769520 - 4769726 | 8072.24 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





