Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qat anti-phage system tatd family nuclease qatd | ECS88_RS25085 | Not Available | Positive | 4666043 - 4666768 | 26865.5 |
| slatt domain-containing protein | ECS88_RS25095 | Not Available | Negative | 4667321 - 4667896 | 21852.5 |
| nucleotide-binding domain-containing protein | ECS88_RS25100 | Not Available | Negative | 4667904 - 4669232 | 51003.9 |
| tail fiber assembly protein | ECS88_RS25105 | Not Available | Negative | 4669367 - 4669552 | 6841.17 |
| is3 family transposase | ECS88_RS25110 | P0CF79 | Negative | 4669573 - 4670729 | 45271.7 |
| tail fiber assembly protein | ECS88_RS25115 | Q3J6K9 | Negative | 4670802 - 4671146 | 12421.9 |
| tail fiber assembly protein | ECS88_RS25125 | Not Available | Negative | 4671764 - 4672457 | 25644.6 |
| basic amino acid/polyamine antiporter | ECS88_RS25130 | Q9Z6M8 | Positive | 4672710 - 4674179 | 53413.7 |
| orn/lys/arg decarboxylase n-terminal domain-containing protein | ECS88_RS25135 | Not Available | Positive | 4674284 - 4676653 | 88728.2 |
| basic amino acid/polyamine antiporter | ECS88_RS25140 | Q9PK20 | Positive | 4676728 - 4678227 | 53725.7 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





