Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease dtpc | ECS88_RS24770 | P39276 | Negative | 4613893 - 4615350 | 52969.7 |
| lysine decarboxylase cada | ECS88_RS24775 | P0A9H4 | Negative | 4615409 - 4617556 | 81250.7 |
| cadaverine/lysine antiporter | ECS88_RS24780 | P0AAF0 | Negative | 4617636 - 4618970 | 46667.8 |
| lysine decarboxylation/transport transcriptional activator cadc | ECS88_RS24790 | P23890 | Negative | 4619336 - 4620874 | 57876.2 |
| tail fiber assembly protein | ECS88_RS28355 | Not Available | Negative | 4621134 - 4621245 | 4339.17 |
| tail fiber assembly protein | ECS88_RS24800 | Not Available | Negative | 4621709 - 4622269 | 21604.1 |
| duf957 domain-containing protein | ECS88_RS24805 | Not Available | Negative | 4622354 - 4622551 | 7396.81 |
| tail fiber assembly protein | ECS88_RS27485 | Not Available | Negative | 4622579 - 4622776 | 7080.28 |
| type iv toxin-antitoxin system cytoskeleton-binding toxin cbta | ECS88_RS24810 | Not Available | Negative | 4622773 - 4623150 | 14043.9 |
| type iv toxin-antitoxin system yeeu family antitoxin | ECS88_RS24815 | Not Available | Negative | 4623239 - 4623607 | 13639.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





