Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2238 domain-containing protein | ECS88_RS24710 | P39270 | Negative | 4603845 - 4604495 | 24106.3 |
| class i fumarate hydratase | ECS88_RS24715 | P14407 | Negative | 4604618 - 4606264 | 60119.7 |
| anaerobic c4-dicarboxylate transporter dcub | ECS88_RS24720 | P0ABP1 | Negative | 4606342 - 4607682 | 47938.2 |
| two-component system response regulator dcur | ECS88_RS24730 | P59338 | Negative | 4608253 - 4608972 | 27518.0 |
| sensor histidine kinase | ECS88_RS24735 | P59340 | Negative | 4608969 - 4610600 | 60540.3 |
| 4fe-4s mono-cluster protein yjdi | ECS88_RS24740 | P0AF60 | Positive | 4610781 - 4611011 | 8564.34 |
| gnat family n-acetyltransferase | ECS88_RS24745 | P39274 | Positive | 4611023 - 4611295 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | ECS88_RS24755 | P0AF62 | Positive | 4611523 - 4611819 | 11441.5 |
| type v toxin-antitoxin system toxin ghot | ECS88_RS24760 | P64648 | Positive | 4611847 - 4612020 | 6555.44 |
| lysine--trna ligase | ECS88_RS24765 | Q8FAT5 | Negative | 4612139 - 4613656 | 57858.0 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





