Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | ECS88_RS24305 | B7UPM7 | Negative | 4526652 - 4529474 | 103890.0 |
| single-stranded dna-binding protein ssb1 | ECS88_RS24315 | P0AGE2 | Positive | 4529728 - 4530264 | 18976.1 |
| yjcb family protein | ECS88_RS24320 | P32700 | Negative | 4530363 - 4530644 | 10288.0 |
| c-di-gmp phosphodiesterase pdec | ECS88_RS24330 | P32701 | Positive | 4531073 - 4532659 | 60696.4 |
| superoxide response transcriptional regulator soxs | ECS88_RS24335 | P0A9E4 | Negative | 4532662 - 4532985 | 12911.6 |
| redox-sensitive transcriptional activator soxr | ECS88_RS24340 | P0ACS3 | Positive | 4533071 - 4533535 | 17249.9 |
| guanine/hypoxanthine transporter ghxp | ECS88_RS24360 | P0AF53 | Positive | 4534082 - 4535431 | 45762.5 |
| na+/h+ antiporter | ECS88_RS24365 | P32703 | Positive | 4535582 - 4537231 | 60526.6 |
| lysr family transcriptional regulator | ECS88_RS24370 | P39592 | Negative | 4537267 - 4538151 | 33106.7 |
| cida/lrga family protein | ECS88_RS24375 | Q65DJ4 | Positive | 4538255 - 4538665 | 15472.9 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





