Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' ssdna/rna exonuclease tatd | ECS88_RS23015 | Q0SZ31 | Positive | 4256549 - 4257331 | 29036.7 |
| transcription/translation regulatory transformer protein rfah | ECS88_RS23020 | Q0TAL4 | Negative | 4257328 - 4257816 | 18357.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | ECS88_RS23025 | P0AAB5 | Positive | 4257983 - 4259476 | 55606.8 |
| nad(p)h-flavin reductase | ECS88_RS23030 | P0AEN3 | Positive | 4259522 - 4260223 | 26243.5 |
| acetyl-coa c-acyltransferase fada | ECS88_RS23035 | A1AI32 | Negative | 4260506 - 4261669 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | ECS88_RS23040 | B7MHD1 | Negative | 4261679 - 4263868 | 79535.5 |
| xaa-pro dipeptidase | ECS88_RS23045 | B7UNH5 | Positive | 4264058 - 4265389 | 50191.9 |
| impact family protein | ECS88_RS23050 | P27862 | Positive | 4265389 - 4266003 | 21690.0 |
| trk system potassium transporter trkh | ECS88_RS23055 | P0AFZ8 | Positive | 4266042 - 4267493 | 52948.8 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | ECS88_RS23060 | P0ACB6 | Positive | 4267505 - 4268050 | 21227.4 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





