Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yiab | ECS88_RS21475 | P11286 | Negative | 3940793 - 3941134 | 12523.9 |
| xylulokinase | ECS88_RS21480 | P09099 | Negative | 3941303 - 3942757 | 52613.4 |
| xylose isomerase | ECS88_RS21485 | B7ULC6 | Negative | 3942829 - 3944151 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | ECS88_RS21490 | P37387 | Positive | 3944517 - 3945509 | 35722.1 |
| d-xylose abc transporter atp-binding protein | ECS88_RS21495 | Q1R528 | Positive | 3945587 - 3947128 | 56433.8 |
| xylose abc transporter permease xylh | ECS88_RS21500 | P0AGI6 | Positive | 3947106 - 3948287 | 41033.5 |
| tail fiber assembly protein | ECS88_RS21505 | P0ACI5 | Positive | 3948365 - 3949532 | 44416.3 |
| protein bax | ECS88_RS21510 | P27297 | Negative | 3949640 - 3950464 | 30869.3 |
| alpha-amylase | ECS88_RS21515 | P25718 | Positive | 3950784 - 3952814 | 75775.5 |
| valine--pyruvate transaminase | ECS88_RS21520 | P09053 | Positive | 3952992 - 3954245 | 46715.9 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





