Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | ECS88_RS21190 | P69909 | Negative | 3880493 - 3881893 | 52687.0 |
| cytochrome c peroxidase | ECS88_RS21195 | P37197 | Negative | 3882104 - 3883501 | 51572.3 |
| alpha,alpha-trehalase | ECS88_RS21200 | B7UL72 | Positive | 3883906 - 3885555 | 63727.1 |
| response regulator transcription factor | ECS88_RS21205 | P37640 | Negative | 3885606 - 3886208 | 22586.5 |
| lysr family transcriptional regulator | ECS88_RS21210 | P37641 | Positive | 3886728 - 3887627 | 33237.4 |
| inner membrane protein yhjd | ECS88_RS21215 | P37642 | Positive | 3887676 - 3888689 | 37902.6 |
| mfs transporter | ECS88_RS21220 | P37643 | Positive | 3889082 - 3890404 | 47226.9 |
| asma family protein | ECS88_RS21225 | P37645 | Negative | 3890457 - 3892505 | 73901.0 |
| cyclic-guanylate-specific phosphodiesterase | ECS88_RS21230 | P37646 | Negative | 3892575 - 3893342 | 29547.8 |
| 2-dehydro-3-deoxygluconokinase | ECS88_RS21240 | P37647 | Positive | 3893574 - 3894503 | 34009.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





