Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system secretin gspd | ECS88_RS20070 | P45758 | Positive | 3661892 - 3663844 | 70747.3 |
| type ii secretion system atpase gspe | ECS88_RS20075 | P45759 | Positive | 3663854 - 3665335 | 54670.0 |
| type ii secretion system inner membrane protein gspf | ECS88_RS20080 | P41441 | Positive | 3665332 - 3666528 | 44383.9 |
| type ii secretion system major pseudopilin gspg | ECS88_RS20085 | P41442 | Positive | 3666538 - 3666975 | 15925.1 |
| type ii secretion system minor pseudopilin gsph | ECS88_RS20090 | P41443 | Positive | 3666983 - 3667492 | 18484.0 |
| type ii secretion system minor pseudopilin gspi | ECS88_RS20095 | P45760 | Positive | 3667489 - 3667884 | 14583.0 |
| type ii secretion system minor pseudopilin gspj | ECS88_RS20100 | P45761 | Positive | 3667877 - 3668464 | 22246.6 |
| type ii secretion system minor pseudopilin gspk | ECS88_RS20105 | P45762 | Positive | 3668457 - 3669440 | 37468.5 |
| type ii secretion system protein gspl | ECS88_RS20110 | P45763 | Positive | 3669455 - 3670618 | 44622.3 |
| type ii secretion system protein gspm | ECS88_RS20115 | P36678 | Positive | 3670615 - 3671076 | 17299.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





