Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | ECS88_RS28110 | P11865 | Positive | 3481452 - 3481553 | 3962.78 |
| tail fiber assembly protein | ECS88_RS28115 | Not Available | Positive | 3481556 - 3481618 | 2413.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 3481762 - 3482138 | Not Available |
| glycerate 2-kinase | ECS88_RS19025 | P23524 | Negative | 3482171 - 3483316 | 39064.6 |
| 2-hydroxy-3-oxopropionate reductase | ECS88_RS19030 | P0ABQ3 | Negative | 3483413 - 3484303 | 30691.7 |
| 2-dehydro-3-deoxyglucarate aldolase | ECS88_RS19035 | A7ZS18 | Negative | 3484333 - 3485103 | 27400.6 |
| galactarate/glucarate/glycerate transporter garp | ECS88_RS19040 | P0AA81 | Negative | 3485119 - 3486453 | 49030.1 |
| galactarate dehydratase | ECS88_RS19045 | P39829 | Positive | 3486828 - 3488399 | 56337.8 |
| aga operon transcriptional regulator agar | ECS88_RS19050 | P0ACK4 | Negative | 3488451 - 3489275 | 30071.8 |
| tagatose-bisphosphate aldolase subunit kbaz | ECS88_RS19060 | B7MB55 | Positive | 3489524 - 3490804 | 47221.1 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





