Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfidase | ECS88_RS18970 | B7MB40 | Negative | 3468945 - 3470255 | 45336.8 |
| amino acid permease | ECS88_RS18975 | P42628 | Negative | 3470283 - 3471614 | 48299.6 |
| l-serine ammonia-lyase | ECS88_RS18980 | P42630 | Negative | 3471889 - 3473253 | 48564.6 |
| enamine/imine deaminase | ECS88_RS18985 | P0AGL3 | Negative | 3473325 - 3473714 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | ECS88_RS18990 | P42632 | Negative | 3473728 - 3476022 | 85990.5 |
| propionate kinase | ECS88_RS18995 | P59244 | Negative | 3476056 - 3477264 | 43423.7 |
| threonine/serine transporter tdcc | ECS88_RS19000 | B7MB46 | Negative | 3477290 - 3478621 | 48861.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | ECS88_RS19005 | P0AGF8 | Negative | 3478643 - 3479632 | 35234.5 |
| transcriptional regulator tdca | ECS88_RS19010 | P0ACQ8 | Negative | 3479725 - 3480663 | 34598.9 |
| transcriptional activator tdcr | ECS88_RS27835 | P11866 | Positive | 3480979 - 3481197 | 8495.16 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





