Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quorum sensing histidine kinase qsec | ECS88_RS18490 | P40719 | Positive | 3375539 - 3376888 | 50247.5 |
| duf2645 family protein | ECS88_RS18495 | Q46867 | Negative | 3376934 - 3377266 | 13244.7 |
| hypothetical protein | ECS88_RS28100 | Not Available | Negative | 3377273 - 3377983 | 27477.2 |
| hcp family type vi secretion system effector | ECS88_RS28105 | Not Available | Negative | 3377986 - 3378465 | 18203.6 |
| nadph:quinone oxidoreductase mdab | ECS88_RS18505 | P0AEY7 | Positive | 3378715 - 3379296 | 21892.1 |
| putative quinol monooxygenase | ECS88_RS18510 | P0ADU3 | Positive | 3379327 - 3379641 | 11533.1 |
| murr/rpir family transcriptional regulator | ECS88_RS18515 | Not Available | Negative | 3379686 - 3380573 | 32194.3 |
| iron-siderophore abc transporter substrate-binding protein | ECS88_RS18520 | Not Available | Negative | 3380570 - 3381517 | 34477.7 |
| iron abc transporter permease | ECS88_RS18525 | P49937 | Negative | 3381528 - 3382565 | 36471.4 |
| iron abc transporter permease | ECS88_RS18530 | O34933 | Negative | 3382574 - 3383557 | 33843.0 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





