Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | ECS88_RS18120 | Q8VPC3 | Negative | 3297230 - 3297601 | 13705.6 |
| type ii secretion system minor pseudopilin gsph | ECS88_RS18125 | P45774 | Negative | 3297598 - 3298161 | 21140.7 |
| type ii secretion system major pseudopilin gspg | ECS88_RS18130 | P45773 | Negative | 3298165 - 3298620 | 16647.8 |
| type ii secretion system inner membrane protein gspf | ECS88_RS18135 | P45780 | Negative | 3298637 - 3299860 | 44894.7 |
| type ii secretion system atpase gspe | ECS88_RS18140 | P37093 | Negative | 3299860 - 3301353 | 55142.6 |
| type ii secretion system secretin gspd | ECS88_RS18145 | E3PJ86 | Negative | 3301353 - 3303413 | 74185.1 |
| type ii secretion system protein gspc | ECS88_RS18150 | Q46834 | Negative | 3303443 - 3304402 | 35866.6 |
| type ii secretion system pilot lipoprotein gsps-beta | ECS88_RS18155 | Q46835 | Negative | 3304420 - 3304830 | 14686.8 |
| prepilin peptidase pppa | ECS88_RS18160 | E3PJ89 | Negative | 3304896 - 3305705 | 29430.7 |
| lipoprotein metalloprotease ssle | ECS88_RS18170 | P0CK95 | Negative | 3305869 - 3310431 | 167292.0 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





