Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0149 family protein ygfb | ECS88_RS17360 | A7ZR19 | Negative | 3164390 - 3164968 | 21230.8 |
| cell division protein zapa | ECS88_RS17370 | A7ZR20 | Positive | 3165136 - 3165465 | 12594.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3165507 - 3165690 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | ECS88_RS17380 | P0AC29 | Positive | 3165711 - 3166313 | 23301.5 |
| type i toxin-antitoxin system toxin ibsc | ECS88_RS17385 | Not Available | Negative | 3166415 - 3166474 | 2219.08 |
| phosphoglycerate dehydrogenase | ECS88_RS17395 | P0A9T2 | Negative | 3166703 - 3167935 | 44178.4 |
| ribose-5-phosphate isomerase rpia | ECS88_RS17400 | A7ZR23 | Negative | 3168191 - 3168850 | 22861.8 |
| lysr substrate-binding domain-containing protein | ECS88_RS17405 | P64563 | Negative | 3168906 - 3169136 | 8372.49 |
| dna-binding transcriptional regulator argp | ECS88_RS17410 | A7ZR24 | Positive | 3169277 - 3170170 | 33473.6 |
| methylmalonyl-coa mutase family protein | ECS88_RS17420 | P27253 | Positive | 3170373 - 3171428 | 38947.6 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





