Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | ECS88_RS17110 | P37769 | Negative | 3104814 - 3105575 | 27056.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | ECS88_RS17115 | B7MM49 | Negative | 3105605 - 3106441 | 31078.1 |
| acetyl-coa c-acetyltransferase | ECS88_RS17120 | Q46939 | Negative | 3106728 - 3107909 | 41019.2 |
| amino acid permease | ECS88_RS17125 | P63342 | Positive | 3108164 - 3109393 | 45101.9 |
| Trna-gly | Not Available | Not Available | Positive | 3109710 - 3109783 | Not Available |
| amidase activator acts | ECS88_RS17135 | Q46798 | Negative | 3109862 - 3110617 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | ECS88_RS17145 | Q46799 | Positive | 3111031 - 3113328 | 82677.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | ECS88_RS17150 | Q46800 | Positive | 3113339 - 3114217 | 31519.5 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | ECS88_RS17155 | Q46801 | Positive | 3114214 - 3114693 | 16921.8 |
| sigma-54-dependent fis family transcriptional regulator | ECS88_RS17160 | Q46802 | Negative | 3114733 - 3116511 | 66042.9 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





