Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | ECS88_RS16915 | Not Available | Positive | 3054263 - 3055873 | 60082.2 |
| paar domain-containing protein | ECS88_RS16920 | Not Available | Positive | 3055879 - 3057456 | 58843.0 |
| hypothetical protein | ECS88_RS16925 | Not Available | Positive | 3057531 - 3058085 | 21799.5 |
| hypothetical protein | ECS88_RS16930 | Not Available | Positive | 3058342 - 3058785 | 16957.4 |
| type vi secretion system baseplate subunit tssf | ECS88_RS16935 | Not Available | Positive | 3059155 - 3060915 | 67253.3 |
| type vi secretion system baseplate subunit tssg | ECS88_RS16940 | Not Available | Positive | 3060879 - 3061958 | 39467.8 |
| type vi secretion system lipoprotein tssj | ECS88_RS16945 | Not Available | Positive | 3061939 - 3062475 | 20531.9 |
| type vi secretion system baseplate subunit tsse | ECS88_RS16950 | Not Available | Positive | 3062479 - 3062907 | 16290.8 |
| vasl domain-containing protein | ECS88_RS16955 | Not Available | Positive | 3062907 - 3064283 | 51951.5 |
| phosphoglycerate dehydrogenase | ECS88_RS16960 | O29445 | Negative | 3064585 - 3065532 | 34398.6 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





