Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | ECS88_RS16865 | Not Available | Positive | 3040376 - 3040867 | 18579.8 |
| type vi secretion system atpase tssh | ECS88_RS16870 | Q9I742 | Positive | 3041059 - 3043704 | 98029.4 |
| type vi secretion system vgr family protein | ECS88_RS16875 | Q9I3K1 | Positive | 3043716 - 3046196 | 91729.6 |
| triacylglycerol lipase | ECS88_RS16880 | Not Available | Positive | 3046216 - 3047382 | 43794.5 |
| hypothetical protein | ECS88_RS28090 | Not Available | Positive | 3047364 - 3047975 | 23076.1 |
| hypothetical protein | ECS88_RS16890 | Not Available | Positive | 3047950 - 3048783 | 32021.6 |
| t6ss immunity protein tli4 family protein | ECS88_RS16895 | Not Available | Positive | 3048752 - 3049045 | 11526.8 |
| paar domain-containing protein | ECS88_RS16900 | Not Available | Positive | 3049509 - 3049769 | 8846.61 |
| hypothetical protein | ECS88_RS16905 | Not Available | Positive | 3049771 - 3050907 | 44179.4 |
| imcf-related family protein | ECS88_RS16910 | Not Available | Positive | 3050917 - 3054270 | 125355.0 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





