Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | ECS88_RS16810 | Q46927 | Negative | 3031418 - 3032224 | 28562.6 |
| murein transglycosylase a | ECS88_RS16815 | P0A936 | Negative | 3032301 - 3033398 | 40441.0 |
| Trna-met | Not Available | Not Available | Positive | 3033607 - 3033683 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3033717 - 3033793 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3033827 - 3033903 | Not Available |
| type vi secretion system contractile sheath small subunit | ECS88_RS16840 | Not Available | Positive | 3034539 - 3035039 | 18726.3 |
| type vi secretion system contractile sheath large subunit | ECS88_RS16845 | Not Available | Positive | 3035098 - 3036636 | 58021.7 |
| type vi secretion system baseplate subunit tssk | ECS88_RS16850 | Not Available | Positive | 3036654 - 3037991 | 49718.8 |
| type vi secretion system protein tssl, short form | ECS88_RS16855 | Not Available | Positive | 3037988 - 3038653 | 25311.8 |
| ompa family protein | ECS88_RS16860 | Not Available | Positive | 3038666 - 3040318 | 60409.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





