Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | ECS88_RS16760 | B7MLC3 | Positive | 3021966 - 3023741 | 64993.4 |
| l-fuculokinase | ECS88_RS16765 | P11553 | Positive | 3023850 - 3025268 | 52254.6 |
| l-fucose mutarotase | ECS88_RS16770 | A7ZQP8 | Positive | 3025270 - 3025692 | 15474.0 |
| l-fucose operon activator | ECS88_RS16775 | P0ACK8 | Positive | 3025750 - 3026481 | 27393.8 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | ECS88_RS16780 | B7MLC7 | Negative | 3026525 - 3027625 | 41827.4 |
| duf423 domain-containing protein | ECS88_RS16785 | P0ADR4 | Negative | 3027618 - 3028013 | 14348.0 |
| glycine cleavage system transcriptional regulator gcva | ECS88_RS16790 | P0A9F8 | Negative | 3028032 - 3028949 | 34403.4 |
| ygdi/ygdr family lipoprotein | ECS88_RS16795 | P65293 | Negative | 3029300 - 3029527 | 8174.67 |
| cysteine desulfurase csda | ECS88_RS16800 | Q46925 | Positive | 3029719 - 3030924 | 43361.7 |
| cysteine desulfurase sulfur acceptor subunit csde | ECS88_RS16805 | P0AGF3 | Positive | 3030924 - 3031367 | 15925.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





