Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycf | ECS88_RS16350 | P16432 | Negative | 2935772 - 2936314 | 20377.5 |
| formate hydrogenlyase subunit hyce | ECS88_RS16355 | P16431 | Negative | 2936324 - 2938033 | 64970.1 |
| formate hydrogenlyase subunit hycd | ECS88_RS16360 | P16430 | Negative | 2938051 - 2938974 | 33016.4 |
| formate hydrogenlyase subunit 3 | ECS88_RS16365 | P16429 | Negative | 2938977 - 2940803 | 64171.3 |
| formate hydrogenlyase subunit hycb | ECS88_RS16370 | P0AAK2 | Negative | 2940800 - 2941411 | 21906.4 |
| formate hydrogenlyase regulator hyca | ECS88_RS16375 | P0AEV5 | Negative | 2941536 - 2941997 | 17642.0 |
| hydrogenase maturation nickel metallochaperone hypa | ECS88_RS16380 | P0A701 | Positive | 2942209 - 2942559 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | ECS88_RS16385 | P0AAN4 | Positive | 2942563 - 2943435 | 31547.8 |
| hydrogenase 3 maturation protein hypc | ECS88_RS16390 | P0AAM5 | Positive | 2943426 - 2943698 | 9732.58 |
| hydrogenase formation protein hypd | ECS88_RS16395 | P24192 | Positive | 2943698 - 2944819 | 41367.7 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





