Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | ECS88_RS15705 | Not Available | Positive | 2836165 - 2838054 | 72753.9 |
| hypothetical protein | ECS88_RS15990 | Not Available | Negative | 2873451 - 2874050 | 22729.6 |
| stas-like domain-containing protein | ECS88_RS15995 | Not Available | Negative | 2874079 - 2874405 | 12255.8 |
| hypothetical protein | ECS88_RS16000 | Not Available | Negative | 2874410 - 2875321 | 33945.6 |
| glutarate dioxygenase glah | ECS88_RS16015 | B7MJS0 | Positive | 2876182 - 2877159 | 37375.6 |
| l-2-hydroxyglutarate oxidase | ECS88_RS16020 | B7N6P4 | Positive | 2877179 - 2878447 | 46040.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase | ECS88_RS16025 | P25526 | Positive | 2878470 - 2879918 | 51832.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | ECS88_RS16030 | P22256 | Positive | 2879932 - 2881212 | 45632.2 |
| gaba permease | ECS88_RS16035 | P25527 | Positive | 2881450 - 2882850 | 51115.1 |
| dna-binding transcriptional regulator csir | ECS88_RS16040 | P37338 | Positive | 2882871 - 2883533 | 25048.4 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





