Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | ECS88_RS14670 | P33570 | Positive | 2624911 - 2626914 | 73130.9 |
| duf1176 domain-containing protein | ECS88_RS14675 | P76559 | Negative | 2626991 - 2628034 | 38809.6 |
| gdp-mannose pyrophosphatase nudk | ECS88_RS14685 | A1ADX2 | Negative | 2628160 - 2628735 | 21723.0 |
| formate-dependent uric acid utilization protein aega | ECS88_RS14690 | P37127 | Negative | 2628803 - 2630782 | 71829.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | ECS88_RS14695 | P27896 | Positive | 2630988 - 2632688 | 63659.6 |
| multidrug efflux rnd transporter permease acrd | ECS88_RS14700 | P24177 | Positive | 2632852 - 2635965 | 113054.0 |
| protein ypfm | ECS88_RS27390 | Not Available | Negative | 2636064 - 2636123 | 2408.02 |
| arsc family reductase | ECS88_RS14705 | P24178 | Positive | 2636504 - 2636860 | 13586.3 |
| succinyl-diaminopimelate desuccinylase | ECS88_RS14710 | B7MHW4 | Positive | 2636864 - 2637991 | 41271.4 |
| ypfn family protein | ECS88_RS14715 | A7ZPR6 | Positive | 2638019 - 2638219 | 8071.78 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





