Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfdx family protein | ECS88_RS14265 | P58403 | Negative | 2550666 - 2551301 | 22964.4 |
| colanic acid biosynthesis lipoprotein ypdi | ECS88_RS14270 | O32528 | Positive | 2551597 - 2551872 | 10043.3 |
| yfdy family protein | ECS88_RS14275 | P76521 | Negative | 2551949 - 2552191 | 8969.6 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | ECS88_RS14280 | P0ACV2 | Positive | 2552544 - 2553464 | 35570.6 |
| membrane protein ypdk | ECS88_RS27385 | Not Available | Positive | 2553820 - 2553891 | 2704.57 |
| alanine transaminase | ECS88_RS14285 | P77434 | Negative | 2553956 - 2555194 | 46218.8 |
| two-component system sensor histidine kinase ypda | ECS88_RS14290 | P0AA94 | Positive | 2555571 - 2557268 | 62679.3 |
| two-component system response regulator ypdb | ECS88_RS14295 | Q8FFE0 | Positive | 2557283 - 2558020 | 28823.7 |
| arac family transcriptional regulator | ECS88_RS14300 | P77396 | Positive | 2558033 - 2558890 | 32397.5 |
| phosphoenolpyruvate--protein phosphotransferase | ECS88_RS14305 | Q8FFD8 | Negative | 2558893 - 2561388 | 91985.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





