Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | ECS88_RS13420 | B7UFR4 | Negative | 2396861 - 2397463 | 22394.9 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | ECS88_RS13425 | B7MG20 | Positive | 2397771 - 2398910 | 41593.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | ECS88_RS13430 | B7MG21 | Positive | 2398914 - 2399882 | 36254.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | ECS88_RS13435 | B7MG22 | Positive | 2399882 - 2401864 | 74322.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | ECS88_RS13440 | B7UFR8 | Positive | 2401861 - 2402751 | 33005.4 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | ECS88_RS13445 | B7MG24 | Positive | 2402751 - 2404403 | 62598.0 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | ECS88_RS13450 | B7MG25 | Positive | 2404400 - 2404735 | 12166.6 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | ECS88_RS13455 | B7MG26 | Positive | 2404735 - 2405121 | 14076.0 |
| signal transduction protein pmrd | ECS88_RS13460 | P37590 | Negative | 2405115 - 2405381 | 9859.03 |
| o-succinylbenzoate--coa ligase | ECS88_RS13465 | P37353 | Negative | 2405491 - 2406846 | 50182.5 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





