Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic glycerol-3-phosphate dehydrogenase subunit glpc | ECS88_RS13370 | P0A997 | Positive | 2387304 - 2388494 | 44124.5 |
| isncy family transposase | ECS88_RS13375 | P37014 | Positive | 2388687 - 2389646 | 37100.5 |
| tail fiber assembly protein | ECS88_RS13380 | V9HVX0 | Positive | 2389647 - 2389844 | 7391.86 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | ECS88_RS13385 | B7MG11 | Negative | 2389885 - 2390688 | 28912.7 |
| tail fiber assembly protein | ECS88_RS13390 | P76470 | Negative | 2390706 - 2391995 | 45995.1 |
| l-rhamnonate dehydratase | ECS88_RS13395 | B7MG14 | Negative | 2392052 - 2393257 | 44190.9 |
| iclr family transcriptional regulator | ECS88_RS13400 | P77732 | Negative | 2393272 - 2394054 | 29092.2 |
| nicotinamide mononucleotide deamidase-related protein yfay | ECS88_RS13405 | C4ZU91 | Negative | 2394274 - 2395476 | 44220.2 |
| yfaz family outer membrane protein | ECS88_RS13410 | P76471 | Negative | 2395576 - 2396118 | 18518.6 |
| nucleoside triphosphatase nudi | ECS88_RS13415 | B7UFR3 | Positive | 2396397 - 2396822 | 16371.6 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





