Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | ECS88_RS13210 | P33941 | Negative | 2339110 - 2340753 | 61610.5 |
| dna oxidative demethylase alkb | ECS88_RS13215 | P05050 | Negative | 2340829 - 2341479 | 24034.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | ECS88_RS13220 | P06134 | Negative | 2341479 - 2342543 | 39289.0 |
| fad:protein fmn transferase apbe | ECS88_RS13225 | P0AB86 | Negative | 2342617 - 2343672 | 38522.0 |
| porin ompc | ECS88_RS13230 | Q8XE41 | Negative | 2343784 - 2344875 | 39997.9 |
| phosphotransferase rcsd | ECS88_RS13245 | P39838 | Positive | 2345614 - 2348286 | 100370.0 |
| response regulator transcription factor rcsb | ECS88_RS13250 | P69409 | Positive | 2348303 - 2348953 | 23672.0 |
| two-component system sensor histidine kinase rcsc | ECS88_RS13255 | P0DMC5 | Negative | 2349153 - 2352002 | 106542.0 |
| two-component system sensor histidine kinase atos | ECS88_RS13260 | Q06067 | Positive | 2352169 - 2353995 | 67844.2 |
| acetoacetate metabolism transcriptional regulator atoc | ECS88_RS13265 | Q06065 | Positive | 2353992 - 2355377 | 52151.5 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





