Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(16) synthase dusc | ECS88_RS12810 | Q8FFV5 | Negative | 2266468 - 2267418 | 35357.7 |
| cida/lrga family protein | ECS88_RS12815 | B7UFF7 | Positive | 2267657 - 2268055 | 14579.6 |
| cidb/lrgb family autolysis modulator | ECS88_RS12820 | P0AD19 | Positive | 2268052 - 2268747 | 24471.1 |
| cytidine deaminase | ECS88_RS12825 | B7UFF9 | Positive | 2268877 - 2269761 | 31568.6 |
| outer membrane permeability protein sana | ECS88_RS12830 | P0AFY4 | Positive | 2269911 - 2270630 | 27288.5 |
| duf2542 family protein | ECS88_RS12835 | P64538 | Positive | 2270633 - 2270872 | 9264.61 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | ECS88_RS12840 | P76440 | Positive | 2271066 - 2272304 | 44181.9 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | ECS88_RS12845 | P25889 | Positive | 2272298 - 2273533 | 45061.4 |
| galactose/methyl galactoside abc transporter permease mglc | ECS88_RS12850 | P23200 | Negative | 2273776 - 2274786 | 35580.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | ECS88_RS12855 | Q0TFU2 | Negative | 2274802 - 2276322 | 56391.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





