Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter permease yehy | ECS88_RS12750 | P33361 | Negative | 2254445 - 2255602 | 41271.4 |
| glycine betaine abc transporter substrate-binding protein osmf | ECS88_RS12755 | P33362 | Negative | 2255609 - 2256526 | 32597.0 |
| beta-glucosidase bglx | ECS88_RS12760 | P33363 | Negative | 2256716 - 2259013 | 83534.8 |
| d-lactate dehydrogenase | ECS88_RS12765 | P06149 | Positive | 2259209 - 2260924 | 64707.1 |
| d-alanyl-d-alanine endopeptidase | ECS88_RS12770 | P0AFI5 | Negative | 2260963 - 2261895 | 33917.4 |
| yip1 family protein | ECS88_RS12775 | P0AD18 | Negative | 2262069 - 2262656 | 21692.0 |
| deda family protein | ECS88_RS12780 | P33366 | Positive | 2262826 - 2263404 | 21461.9 |
| sdr family oxidoreductase | ECS88_RS12785 | P33368 | Negative | 2263524 - 2264285 | 27023.6 |
| tail fiber assembly protein | ECS88_RS12790 | P33369 | Negative | 2264338 - 2265773 | 52957.1 |
| small membrane protein yohp | ECS88_RS12800 | Not Available | Positive | 2265997 - 2266080 | 3092.28 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





