Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria/pilus periplasmic chaperone | ECS88_RS12645 | P33342 | Negative | 2227507 - 2228181 | 24831.4 |
| fimbrial protein | ECS88_RS12650 | P33343 | Negative | 2228262 - 2228804 | 19017.6 |
| yehe family protein | ECS88_RS12660 | P33344 | Negative | 2229098 - 2229379 | 10178.1 |
| iron-sulfur cluster carrier protein apbc | ECS88_RS12665 | P0AF09 | Negative | 2229642 - 2230751 | 39940.4 |
| methionine--trna ligase | ECS88_RS12670 | B7MEG9 | Positive | 2230883 - 2232916 | 76288.0 |
| duf4132 domain-containing protein | ECS88_RS12675 | Not Available | Positive | 2233057 - 2236845 | 141546.0 |
| duf4132 domain-containing protein yehi | ECS88_RS12680 | P33346 | Positive | 2236855 - 2240487 | 137937.0 |
| tail fiber assembly protein | ECS88_RS12685 | P33347 | Positive | 2240548 - 2240864 | 12119.7 |
| aaa family atpase | ECS88_RS12690 | P33348 | Positive | 2241644 - 2242732 | 39696.7 |
| duf5682 family protein | ECS88_RS12695 | P33349 | Positive | 2242739 - 2245015 | 83549.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





