Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | ECS88_RS12000 | Q9S5G3 | Positive | 2096649 - 2097260 | 22775.1 |
| lps o-antigen chain length determinant protein wzzb | ECS88_RS12005 | P95730 | Negative | 2097432 - 2098409 | 36218.6 |
| udp-glucose 6-dehydrogenase | ECS88_RS12010 | Q8FG45 | Negative | 2098556 - 2099722 | 43588.1 |
| nadp-dependent phosphogluconate dehydrogenase | ECS88_RS12015 | P14062 | Negative | 2099971 - 2101377 | 51453.2 |
| glucose-1-phosphate thymidylyltransferase rfba | ECS88_RS12020 | P55257 | Negative | 2101558 - 2102424 | 32419.3 |
| serine o-acetyltransferase | ECS88_RS12025 | Q5HRM4 | Negative | 2102569 - 2103099 | 19531.1 |
| o-antigen polymerase wzy | ECS88_RS12030 | Not Available | Negative | 2103065 - 2104156 | 41919.6 |
| glycosyltransferase family 2 protein | ECS88_RS12035 | Not Available | Negative | 2104149 - 2105120 | 37405.9 |
| s88 variant o45 family o-antigen flippase | ECS88_RS12040 | Not Available | Negative | 2105113 - 2106375 | 48140.3 |
| hypothetical protein | ECS88_RS12045 | Not Available | Negative | 2106362 - 2107360 | 39379.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





