Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | ECS88_RS11900 | P33011 | Negative | 2079566 - 2080624 | 39957.7 |
| dna gyrase inhibitor sbmc | ECS88_RS11905 | P33012 | Negative | 2080823 - 2081296 | 18062.2 |
| serine-type d-ala-d-ala carboxypeptidase dacd | ECS88_RS11910 | P33013 | Negative | 2081415 - 2082581 | 43294.5 |
| exodeoxyribonuclease i | ECS88_RS11915 | P04995 | Positive | 2082790 - 2084217 | 54484.6 |
| thiosulfate utilization sulfurtransferase tsub/yeed | ECS88_RS11920 | P33014 | Negative | 2084260 - 2084487 | 8092.61 |
| thiosulfate utilization transporter tsua/yeee | ECS88_RS11925 | P33015 | Negative | 2084501 - 2085559 | 38070.7 |
| putrescine/proton symporter plap | ECS88_RS11930 | P0AA48 | Negative | 2085738 - 2087096 | 49540.5 |
| membrane protein yoei | ECS88_RS27360 | Not Available | Negative | 2087086 - 2087148 | 2241.66 |
| lysr substrate-binding domain-containing protein | ECS88_RS11935 | P76369 | Negative | 2087363 - 2088292 | 34181.1 |
| sdr family oxidoreductase | ECS88_RS11940 | P0AD13 | Negative | 2088338 - 2089162 | 29661.6 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





