Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yersiniabactin biosynthesis thioesterase ybtt | ECS88_RS11550 | Q9ZGI1 | Positive | 2024214 - 2025017 | 29827.4 |
| yersiniabactin biosynthesis salycil-amp ligase ybte | ECS88_RS11555 | P40871 | Positive | 2025021 - 2026598 | 57256.5 |
| siderophore yersiniabactin receptor fyua | ECS88_RS11560 | P46359 | Positive | 2026729 - 2028750 | 73657.0 |
| inverse autotransporter beta domain-containing protein | ECS88_RS11565 | Q8X8V7 | Positive | 2029401 - 2030150 | 28109.7 |
| tail fiber assembly protein | ECS88_RS11575 | P76347 | Positive | 2030077 - 2032199 | 75756.6 |
| glycosyltransferase family 9 protein | ECS88_RS11580 | P76349 | Negative | 2032369 - 2033421 | 39489.4 |
| shikimate transporter | ECS88_RS11585 | P76350 | Positive | 2033736 - 2035052 | 47784.1 |
| amp nucleosidase | ECS88_RS11590 | P0AE13 | Positive | 2035154 - 2036608 | 54038.0 |
| yebc/pmpr family dna-binding transcriptional regulator | ECS88_RS11595 | Q0TGH3 | Positive | 2036951 - 2037667 | 25868.5 |
| Trna-asn | Not Available | Not Available | Positive | 2038121 - 2038196 | Not Available |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





