Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | ECS88_RS09365 | Q8FHD2 | Positive | 1617933 - 1618679 | 27234.5 |
| dna-binding transcriptional regulator rspr | ECS88_RS09370 | P0ACM2 | Positive | 1618768 - 1619454 | 26566.7 |
| putative selenium delivery protein ydfz | ECS88_RS09375 | P64465 | Positive | 1619631 - 1619834 | 7276.83 |
| mannitol dehydrogenase family protein | ECS88_RS09380 | P77260 | Negative | 1619870 - 1621330 | 53705.3 |
| tail fiber assembly protein | ECS88_RS09385 | P77228 | Negative | 1621419 - 1621682 | 9440.61 |
| zn-dependent oxidoreductase | ECS88_RS09395 | P38105 | Negative | 1621831 - 1622850 | 36512.0 |
| starvation-sensing protein rspa | ECS88_RS09400 | Q8FHC7 | Negative | 1622862 - 1624076 | 45986.0 |
| ynfa family protein | ECS88_RS09410 | B7URS1 | Negative | 1624282 - 1624608 | 11902.1 |
| duf1283 family protein | ECS88_RS09415 | B7URS2 | Positive | 1624743 - 1625084 | 12974.5 |
| spermidine n1-acetyltransferase | ECS88_RS09420 | P0A952 | Positive | 1625119 - 1625679 | 21902.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





