Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | ECS88_RS09205 | P23874 | Negative | 1591112 - 1592434 | 49429.1 |
| type ii toxin-antitoxin system antitoxin hipb | ECS88_RS09210 | Q8FHF3 | Negative | 1592434 - 1592700 | 10017.0 |
| trans-aconitate 2-methyltransferase | ECS88_RS09215 | B7MMY3 | Positive | 1593008 - 1593766 | 28958.4 |
| bestrophin family protein | ECS88_RS09220 | P76146 | Negative | 1593770 - 1594684 | 34802.0 |
| tagaturonate reductase | ECS88_RS09230 | B7URP8 | Negative | 1594881 - 1596332 | 54837.3 |
| diguanylate cyclase | ECS88_RS09240 | Q8XAZ4 | Negative | 1596559 - 1597977 | 52033.3 |
| duf4186 domain-containing protein | ECS88_RS09250 | P76148 | Negative | 1598116 - 1598475 | 13570.5 |
| glutaminase b | ECS88_RS09255 | P0A6W2 | Negative | 1598475 - 1599401 | 33517.6 |
| succinate-semialdehyde dehydrogenase | ECS88_RS09260 | P76149 | Negative | 1599465 - 1600853 | 49716.7 |
| putrescine utilization regulator ptrr | ECS88_RS09265 | P77309 | Positive | 1600954 - 1601835 | 32432.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





