Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein tripeptide abc transporter substrate-binding protein mppa | ECS88_RS08550 | P77348 | Positive | 1455159 - 1456772 | 59903.3 |
| low conductance mechanosensitive channel ynai | ECS88_RS08555 | P0AEB6 | Negative | 1456823 - 1457854 | 38799.9 |
| duf2534 family protein | ECS88_RS08560 | P64447 | Positive | 1458098 - 1458355 | 9339.82 |
| universal stress protein uspe | ECS88_RS08565 | P0AAC2 | Negative | 1458405 - 1459355 | 35708.9 |
| fumarate/nitrate reduction transcriptional regulator fnr | ECS88_RS08570 | P0A9E7 | Negative | 1459507 - 1460259 | 27968.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | ECS88_RS08575 | P0AFH0 | Negative | 1460454 - 1460969 | 19180.2 |
| tail fiber assembly protein | ECS88_RS08580 | P46133 | Negative | 1460980 - 1461132 | 5759.47 |
| helix-turn-helix transcriptional regulator | ECS88_RS08590 | P76241 | Negative | 1461501 - 1462316 | 30556.3 |
| hlyd family secretion protein | ECS88_RS08595 | P0DPR6 | Positive | 1462413 - 1463441 | 37719.2 |
| dha2 family efflux mfs transporter permease subunit | ECS88_RS08600 | P0DPR7 | Positive | 1463438 - 1464952 | 55685.9 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





