Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese abc transporter substrate-binding protein sita | ECS88_RS07215 | A4N8V8 | Negative | 1226690 - 1227604 | 33428.1 |
| hypothetical protein | ECS88_RS07225 | Not Available | Positive | 1228291 - 1229061 | 30149.2 |
| tail fiber assembly protein | ECS88_RS07235 | P08200 | Positive | 1229518 - 1229685 | 6144.62 |
| hypothetical protein | ECS88_RS27235 | P0DPN9 | Negative | 1229769 - 1229894 | 4909.22 |
| duf1398 domain-containing protein | ECS88_RS07240 | P75988 | Negative | 1229947 - 1230351 | 15823.0 |
| dna-binding transcriptional repressor blur | ECS88_RS07245 | P75989 | Negative | 1230572 - 1231303 | 28262.2 |
| blue light-responsive regulator bluf | ECS88_RS07250 | P75990 | Negative | 1231508 - 1232719 | 45347.6 |
| regulatory protein ycgz | ECS88_RS07255 | P75991 | Positive | 1233033 - 1233269 | 8694.37 |
| hypothetical protein | ECS88_RS07260 | P75992 | Positive | 1233312 - 1233584 | 10318.5 |
| biofilm/acid-resistance regulator arir | ECS88_RS07265 | A1AA91 | Positive | 1233613 - 1233879 | 9696.56 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





